Sopen10g028800

Description : Photosystem II protein Y (PsbY)

Gene families : OG_42_0005644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005644_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g028800
Cluster	HCCA clusters: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36701	No alias	photosystem ii core complex proteins psby, chloroplastic	0.08	Orthogroups_2024-Update
At1g67740	No alias	Putative uncharacterized protein...	0.03	Orthogroups_2024-Update
Bradi3g13970	No alias	photosystem II BY	0.04	Orthogroups_2024-Update
Brara.B01738.1	No alias	component *(PsbY) of PS-II complex	0.02	Orthogroups_2024-Update
Brara.G02733.1	No alias	component *(PsbY) of PS-II complex	0.04	Orthogroups_2024-Update
Cre10.g452100	No alias	photosystem II BY	0.02	Orthogroups_2024-Update
Glyma.05G172300	No alias	photosystem II BY	0.07	Orthogroups_2024-Update
Glyma.11G245400	No alias	photosystem II BY	0.03	Orthogroups_2024-Update
MA_12201g0010	No alias	(at1g67740 : 114.0) PsbY precursor (psbY) mRNA. This...	0.03	Orthogroups_2024-Update
Mp8g12730.1	No alias	component PsbY of PS-II complex	0.03	Orthogroups_2024-Update
Potri.010G052000	No alias	photosystem II BY	0.03	Orthogroups_2024-Update
Pp1s101_95V6	No alias	photosystem ii protein	0.03	Orthogroups_2024-Update
Pp1s221_76V6	No alias	photosystem ii protein	0.04	Orthogroups_2024-Update
Seita.6G082000.1	No alias	component *(PsbY) of PS-II complex	0.1	Orthogroups_2024-Update
Sobic.007G023300.1	No alias	component *(PsbY) of PS-II complex	0.09	Orthogroups_2024-Update
Solyc10g077120	No alias	Photosystem II core complex proteins psbY (AHRD V3.3 ***...	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	InterProScan predictions
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0030145	manganese ion binding	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR009388	PSII_PsbY	87	119
IPR009388	PSII_PsbY	159	191

External Links

No external refs found!