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  5. A4A49_07845

A4A49_07845


Description : agamous-like mads-box protein agl8


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_07845
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
A4A49_18989 No alias agamous-like mads-box protein agl19 0.02 Orthogroups_2024-Update
A4A49_20590 No alias mads-box transcription factor 27 0.03 Orthogroups_2024-Update
At1g24260 No alias At1g24260 [Source:UniProtKB/TrEMBL;Acc:B4F7R9] 0.02 Orthogroups_2024-Update
At1g77980 No alias Agamous-like MADS-box protein AGL66... 0.04 Orthogroups_2024-Update
At3g57390 No alias Agamous-like MADS-box protein AGL18... 0.05 Orthogroups_2024-Update
Bradi3g51800 No alias AGAMOUS-like 6 0.02 Orthogroups_2024-Update
Brara.C04645.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Brara.K00360.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G099577 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
GRMZM2G471089 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.06 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.06 Orthogroups_2024-Update
HORVU3Hr1G095090.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g31748 No alias OsMADS20 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
PSME_00013164-RA No alias (at4g11880 : 108.0) AGL12, AGL14, and AGL17 are all... 0.06 Orthogroups_2024-Update
Pp1s209_130V6 No alias mads-box transcription factor 0.05 Orthogroups_2024-Update
Pp1s88_174V6 No alias mads box 0.03 Orthogroups_2024-Update
Seita.2G002300.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.11 Orthogroups_2024-Update
Seita.3G280400.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Seita.6G194800.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G561000.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G314400.1 No alias MADS/AGL-type transcription factor 0.05 Orthogroups_2024-Update
Solyc10g017630 No alias MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 85 172
IPR002100 TF_MADSbox 10 57
No external refs found!