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  5. Sopen10g029040

Sopen10g029040


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000444 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g029040
Cluster HCCA clusters: Cluster_352

Target Alias Description ECC score Gene Family Method Actions
At2g40200 No alias Transcription factor bHLH51... 0.02 Orthogroups_2024-Update
Glyma.02G041000 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G291400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G105300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Sobic.003G017601.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Solyc10g078380 No alias bHLH transcription factor 064 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 74 121
No external refs found!