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  5. A4A49_08502

A4A49_08502


Description : pentatricopeptide repeat-containing protein


Gene families : OG_42_0004371 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_08502
Cluster HCCA clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Bradi4g00490 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G030900 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os12g44170 No alias pentatricopeptide, putative, expressed 0.04 Orthogroups_2024-Update
Pp1s87_47V6 No alias pentatricopeptide repeat-containing 0.02 Orthogroups_2024-Update
Seita.3G406900.1 No alias Unknown function 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 470 502
IPR002885 Pentatricopeptide_repeat 582 611
IPR002885 Pentatricopeptide_repeat 372 401
IPR002885 Pentatricopeptide_repeat 613 660
IPR002885 Pentatricopeptide_repeat 403 448
IPR002885 Pentatricopeptide_repeat 508 554
No external refs found!