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A4A49_09554


Description : zinc finger ccch domain-containing protein 24


Gene families : OG_42_0005895 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_09554
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Bradi5g02300 No alias zinc finger (CCCH-type) family protein 0.03 Orthogroups_2024-Update
Cre02.g101950 No alias zinc finger (CCCH-type) family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G005690.10 No alias tRNA uridine-methyltransferase *(TRM2) & EC_2.1... 0.03 Orthogroups_2024-Update
LOC_Os04g01480 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.02 Orthogroups_2024-Update
Mp5g00110.1 No alias C3H zinc finger transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G002800.1 No alias tRNA uridine-methyltransferase *(TRM2) & EC_2.1... 0.04 Orthogroups_2024-Update
Solyc11g069340 No alias Zinc finger transcription factor 69 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
BP GO:0006396 RNA processing IEA InterProScan predictions
MF GO:0008173 RNA methyltransferase activity IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025714 Methyltranfer_dom 585 642
IPR010280 U5_MeTrfase_fam 751 799
IPR000504 RRM_dom 160 221
IPR000571 Znf_CCCH 66 93
No external refs found!