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  5. A4A49_09610

A4A49_09610


Description : pentatricopeptide repeat-containing protein, mitochondrial


Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_09610
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
A4A49_09367 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.04 Orthogroups_2024-Update
A4A49_29683 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.04 Orthogroups_2024-Update
A4A49_41972 No alias pentatricopeptide repeat-containing protein, mitochondrial 0.03 Orthogroups_2024-Update
At1g15480 No alias Pentatricopeptide repeat-containing protein At1g15480,... 0.03 Orthogroups_2024-Update
At5g27460 No alias Pentatricopeptide repeat-containing protein At5g27460... 0.04 Orthogroups_2024-Update
Glyma.06G246500 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G132700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G351200.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sopen01g032900 No alias PPR repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 138 166
IPR002885 Pentatricopeptide_repeat 245 271
IPR002885 Pentatricopeptide_repeat 175 202
IPR002885 Pentatricopeptide_repeat 208 238
IPR002885 Pentatricopeptide_repeat 352 373
No external refs found!