1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_09968

A4A49_09968


Description : ring-h2 finger protein atl78


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_09968
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Bradi1g43750 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G231400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G231900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g11460 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g60730 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G075200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G073500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G023500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g081040 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc04g009780 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.03 Orthogroups_2024-Update
Sopen01g038970 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen01g051390 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen04g004890 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen11g001290 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 135 178
No external refs found!