1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_10096

A4A49_10096


Description : mads-box protein soc1


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_10096
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
A4A49_11564 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_22632 No alias floral homeotic protein agamous 0.02 Orthogroups_2024-Update
At1g26310 No alias Transcription factor CAULIFLOWER... 0.06 Orthogroups_2024-Update
At1g77980 No alias Agamous-like MADS-box protein AGL66... 0.04 Orthogroups_2024-Update
At2g42830 No alias K-box region and MADS-box transcription factor family... 0.02 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.04 Orthogroups_2024-Update
Bradi3g46920 No alias AGAMOUS-like 16 0.03 Orthogroups_2024-Update
Brara.C00582.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G026223 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
GRMZM2G099577 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
GRMZM2G171365 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
GRMZM2G171650 No alias AGAMOUS-like 79 0.02 Orthogroups_2024-Update
Glyma.05G148800 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.07G080900 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.08G105400 No alias K-box region and MADS-box transcription factor family protein 0.06 Orthogroups_2024-Update
Glyma.14G183800 No alias AGAMOUS-like 16 0.02 Orthogroups_2024-Update
Glyma.20G153700 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.001G112400 No alias AGAMOUS-like 19 0.05 Orthogroups_2024-Update
Potri.012G132600 No alias AGAMOUS-like 6 0.02 Orthogroups_2024-Update
Seita.2G002300.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.04 Orthogroups_2024-Update
Sobic.007G193300.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Sopen02g033990 No alias SRF-type transcription factor (DNA-binding and... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 2 85
No external refs found!