A4A49_10283

Description : splicing factor u2af small subunit a

Gene families : OG_42_0001056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_10283
Cluster	HCCA clusters: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method	Actions
A4A49_33502	No alias	splicing factor u2af small subunit b	0.03	Orthogroups_2024-Update
Sobic.002G249500.2	No alias	small subunit of U2AF pre-RNA splicing auxiliary factor complex	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	83	139
IPR000571	Znf_CCCH	150	173
IPR000571	Znf_CCCH	14	37

External Links

No external refs found!