Sopen10g030390

Description : EF hand

Gene families : OG_42_0007947 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007947_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g030390
Cluster	HCCA clusters: Cluster_266

Target	Alias	Description	ECC score	Gene Family Method
A4A49_19652	No alias	putative calcium-binding protein cml36	0.05	Orthogroups_2024-Update
A4A49_34239	No alias	putative calcium-binding protein cml35	0.02	Orthogroups_2024-Update
Brara.D02525.1	No alias	calcium sensor *(CML)	0.02	Orthogroups_2024-Update
Solyc10g079420	No alias	Calcium-binding EF-hand (AHRD V3.3 *** A0A103XQG1_CYNCS)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	69	126
IPR002048	EF_hand_dom	140	203

External Links

No external refs found!