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  5. A4A49_10593

A4A49_10593


Description : zinc finger ccch domain-containing protein zfn-like protein


Gene families : OG_42_0000464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_10593
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
45667 No alias zinc finger nuclease 3 0.02 Orthogroups_2024-Update
A4A49_36084 No alias zinc finger ccch domain-containing protein 32 0.01 Orthogroups_2024-Update
At5g16540 No alias Zinc finger CCCH domain-containing protein 57... 0.04 Orthogroups_2024-Update
Bradi4g39137 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Orthogroups_2024-Update
Brara.C03010.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Brara.E03281.1 No alias regulatory protein of RNA homeostasis 0.02 Orthogroups_2024-Update
Brara.J01714.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
GRMZM2G087032 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
GRMZM2G107491 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
GRMZM2G146514 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
Glyma.09G251200 No alias zinc finger protein 1 0.05 Orthogroups_2024-Update
Glyma.10G170800 No alias zinc finger protein 1 0.05 Orthogroups_2024-Update
LOC_Os01g68860 No alias zinc finger C-x8-C-x5-C-x3-H type family protein, expressed 0.02 Orthogroups_2024-Update
MA_71756g0010 No alias (at2g47850 : 148.0) Zinc finger C-x8-C-x5-C-x3-H type... 0.03 Orthogroups_2024-Update
PSME_00001974-RA No alias (q9swf9|zfnl_pea : 135.0) Zinc finger CCCH... 0.03 Orthogroups_2024-Update
Potri.019G053200 No alias zinc finger protein 1 0.04 Orthogroups_2024-Update
Pp1s6_324V6 No alias nucleic acid binding 0.02 Orthogroups_2024-Update
Sobic.005G111700.1 No alias regulatory protein of RNA homeostasis 0.03 Orthogroups_2024-Update
Solyc11g008900 No alias Zinc finger transcription factor 65 0.03 Orthogroups_2024-Update
Sopen11g004680 No alias Zinc finger C-x8-C-x5-C-x3-H type (and similar) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 335 359
IPR000571 Znf_CCCH 42 67
IPR000571 Znf_CCCH 134 158
IPR000571 Znf_CCCH 289 313
IPR000571 Znf_CCCH 90 112
No external refs found!