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  5. Sopen10g030870

Sopen10g030870


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g030870
Cluster HCCA clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
38502 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
A4A49_16244 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_20932 No alias ethylene-responsive transcription factor erf114 0.03 Orthogroups_2024-Update
A4A49_28100 No alias ethylene-responsive transcription factor erf017 0.02 Orthogroups_2024-Update
At2g23340 No alias Ethylene-responsive transcription factor ERF008... 0.02 Orthogroups_2024-Update
At2g46310 No alias Ethylene-responsive transcription factor CRF5... 0.05 Orthogroups_2024-Update
At5g61600 No alias Ethylene-responsive transcription factor ERF104... 0.03 Orthogroups_2024-Update
Brara.H01997.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.I00861.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Brara.I03383.1 No alias subgroup ERF-II-DEAR transcription factor 0.04 Orthogroups_2024-Update
Cre07.g353500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G066158 No alias ERF domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G111415 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G206700 No alias ethylene responsive element binding factor 5 0.03 Orthogroups_2024-Update
Glyma.02G039300 No alias DORNROSCHEN-like 0.02 Orthogroups_2024-Update
Glyma.07G244867 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G015350.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G088790.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G099670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g42585 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g11860 No alias ethylene-responsive transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g47330 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.006G054500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G215600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G183700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.018G038100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Seita.7G176700.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Solyc09g091950 No alias Ethylene-responsive transcription factor ERF062 (AHRD... 0.04 Orthogroups_2024-Update
Sopen02g035420 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen03g037110 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen04g006170 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen05g029570 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen11g007720 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 28 78
No external refs found!