A4A49_11227

Description : germacrene c synthase

Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_11227
Cluster	HCCA clusters: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
HORVU5Hr1G004700.3	No alias	EC_4.2 carbon-oxygen lyase &...	0.02	Orthogroups_2024-Update
LOC_Os08g04500	No alias	terpene synthase, putative, expressed	0.03	Orthogroups_2024-Update
Seita.6G048800.1	No alias	EC_4.2 carbon-oxygen lyase &...	0.03	Orthogroups_2024-Update
Sobic.004G153900.2	No alias	EC_4.2 carbon-oxygen lyase &...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0010333	terpene synthase activity	IEA	InterProScan predictions
MF	GO:0016829	lyase activity	IEA	InterProScan predictions
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005630	Terpene_synthase_metal-bd	291	557
IPR001906	Terpene_synth_N	85	260

External Links

No external refs found!