1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_11564

A4A49_11564


Description : developmental protein sepallata 1


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_11564
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
A4A49_10096 No alias mads-box protein soc1 0.03 Orthogroups_2024-Update
A4A49_14436 No alias agamous-like mads-box protein agl11 0.04 Orthogroups_2024-Update
A4A49_29335 No alias mads-box transcription factor 27 0.03 Orthogroups_2024-Update
At2g42830 No alias K-box region and MADS-box transcription factor family... 0.02 Orthogroups_2024-Update
At5g23260 No alias K-box region and MADS-box transcription factor family... 0.03 Orthogroups_2024-Update
Brara.K00198.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.18G004700 No alias K-box region and MADS-box transcription factor family protein 0.05 Orthogroups_2024-Update
HORVU0Hr1G003020.3 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.03 Orthogroups_2024-Update
HORVU7Hr1G054320.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os03g54170 No alias OsMADS34 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g23950 No alias OsMADS59 - MADS-box family gene with MIKCc type-box 0.03 Orthogroups_2024-Update
LOC_Os06g30810 No alias OsMADS75 - MADS-box family gene with M-alpha type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g32948 No alias OsMADS8 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
MA_101463g0010 No alias (q9xj60|mad50_orysa : 102.0) MADS-box transcription... 0.03 Orthogroups_2024-Update
MA_333471g0010 No alias (at2g45660 : 106.0) Controls flowering and is required... 0.03 Orthogroups_2024-Update
Potri.006G048700 No alias AGAMOUS-like 18 0.04 Orthogroups_2024-Update
Potri.015G134800 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Pp1s209_130V6 No alias mads-box transcription factor 0.01 Orthogroups_2024-Update
Pp1s8_101V6 No alias mikc* mads-box transcription factor 0.02 Orthogroups_2024-Update
Sopen08g021160 No alias SRF-type transcription factor (DNA-binding and... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 83 171
IPR002100 TF_MADSbox 10 57
No external refs found!