A4A49_11852

Description : putative polygalacturonase

Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_11852
Cluster	HCCA clusters: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
A4A49_41445	No alias	putative polygalacturonase	0.03	Orthogroups_2024-Update
Bradi3g09597	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Brara.I04239.1	No alias	EC_3.2 glycosylase	0.03	Orthogroups_2024-Update
GRMZM2G107073	No alias	Pectin lyase-like superfamily protein	0.05	Orthogroups_2024-Update
GRMZM2G135763	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G210900	No alias	Pectin lyase-like superfamily protein	0.04	Orthogroups_2024-Update
Glyma.09G256100	No alias	Pectin lyase-like superfamily protein	0.04	Orthogroups_2024-Update
Potri.005G063400	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Solyc05g049980	No alias	Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4)	0.03	Orthogroups_2024-Update
Solyc06g060170	No alias	Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G33440.1)	0.07	Orthogroups_2024-Update
Sopen05g028340	No alias	Glycosyl hydrolases family 28	0.04	Orthogroups_2024-Update
Sopen06g020290	No alias	Glycosyl hydrolases family 28	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	148	429

External Links

No external refs found!