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  5. A4A49_11943

A4A49_11943


Description : casp-like protein 1c2


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_11943
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
A4A49_10250 No alias casp-like protein 1f1 0.02 Orthogroups_2024-Update
A4A49_12663 No alias casparian strip membrane protein 2 0.05 Orthogroups_2024-Update
Glyma.15G191800 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
HORVU7Hr1G078490.1 No alias lignin polymerization scaffold protein *(CASP) 0.03 Orthogroups_2024-Update
LOC_Os01g13560 No alias membrane associated DUF588 domain containing protein,... 0.02 Orthogroups_2024-Update
Potri.009G160000 No alias Uncharacterised protein family (UPF0497) 0.03 Orthogroups_2024-Update
Seita.3G009500.1 No alias lignin polymerization scaffold protein *(CASP) 0.03 Orthogroups_2024-Update
Seita.3G084500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen01g029100 No alias Domain of unknown function (DUF588) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006702 CASP_dom 5 142
No external refs found!