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  5. Sopen10g031450

Sopen10g031450


Description : Tubulin/FtsZ family, GTPase domain


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g031450
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
170592 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
23468 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
402668 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
A4A49_21669 No alias tubulin beta-2 chain 0.03 Orthogroups_2024-Update
A4A49_64347 No alias tubulin beta-2 chain 0.02 Orthogroups_2024-Update
At4g20890 No alias Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:A0A178UU99] 0.03 Orthogroups_2024-Update
At5g44340 No alias Tubulin beta-4 chain [Source:UniProtKB/Swiss-Prot;Acc:P24636] 0.02 Orthogroups_2024-Update
Brara.A02439.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.B02782.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.04 Orthogroups_2024-Update
Brara.F02178.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.F03751.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.I01840.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.K01811.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre12.g542250 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
Cre12.g549550 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
GRMZM2G108766 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
Glyma.14G219300 No alias tubulin beta-1 chain 0.02 Orthogroups_2024-Update
HORVU0Hr1G026030.2 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
HORVU1Hr1G064870.3 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.04 Orthogroups_2024-Update
Kfl00215_0170 kfl00215_0170_v1.1 (p04690|tbb_chlre : 825.0) Tubulin beta-1/beta-2 chain -... 0.02 Orthogroups_2024-Update
MA_219029g0010 No alias (at5g23860 : 422.0) beta-tubulin, preferentially... 0.02 Orthogroups_2024-Update
MA_230579g0020 No alias (q76fs3|tbb6_orysa : 573.0) Tubulin beta-6 chain (Beta-6... 0.04 Orthogroups_2024-Update
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Orthogroups_2024-Update
Mp2g09390.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 Orthogroups_2024-Update
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Potri.006G035400 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Pp1s218_7V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s252_101V6 No alias tubulin beta 0.04 Orthogroups_2024-Update
Pp1s252_90V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s85_186V6 No alias beta chain 0.02 Orthogroups_2024-Update
Pp1s93_136V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s93_158V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Seita.4G265500.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Sobic.010G224900.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
evm.model.contig_2073.5 No alias (p37832|tbb7_orysa : 682.0) Tubulin beta-7 chain (Beta-7... 0.02 Orthogroups_2024-Update
evm.model.tig00001067.6 No alias (p04690|tbb_chlre : 752.0) Tubulin beta-1/beta-2 chain -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!