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  5. A4A49_12400

A4A49_12400


Description : vesicle-associated membrane protein 727


Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_12400
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Bradi1g05030 No alias vesicle-associated membrane protein 726 0.04 Orthogroups_2024-Update
Brara.C01691.1 No alias R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.03 Orthogroups_2024-Update
Cre06.g278172 No alias vesicle-associated membrane protein 713 0.02 Orthogroups_2024-Update
GRMZM2G008919 No alias vesicle-associated membrane protein 726 0.02 Orthogroups_2024-Update
HORVU5Hr1G107510.2 No alias R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.03 Orthogroups_2024-Update
Kfl00515_0100 kfl00515_0100_v1.1 (at2g32670 : 271.0) member of Synaptobrevin -like... 0.02 Orthogroups_2024-Update
PSME_00046258-RA No alias (at3g54300 : 330.0) Encodes a member of Synaptobrevin... 0.02 Orthogroups_2024-Update
Sobic.002G068300.1 No alias R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010908 Longin_dom 32 97
IPR001388 Synaptobrevin 150 236
No external refs found!