1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen10g032390

Sopen10g032390


Description : PPR repeat family


Gene families : OG_42_0001457 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g032390
Cluster HCCA clusters: Cluster_328

Target Alias Description ECC score Gene Family Method Actions
PSME_00036609-RA No alias (at5g65560 : 318.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 530 578
IPR002885 Pentatricopeptide_repeat 284 333
IPR002885 Pentatricopeptide_repeat 389 438
IPR002885 Pentatricopeptide_repeat 462 507
IPR002885 Pentatricopeptide_repeat 669 716
IPR033443 PPR_long 775 904
IPR002885 Pentatricopeptide_repeat 211 236
IPR002885 Pentatricopeptide_repeat 246 278
IPR002885 Pentatricopeptide_repeat 350 383
IPR002885 Pentatricopeptide_repeat 603 631
IPR002885 Pentatricopeptide_repeat 184 210
IPR002885 Pentatricopeptide_repeat 638 667
No external refs found!