A4A49_13551

Description : atp-dependent rna helicase-like protein db10

Gene families : OG_42_0000814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_13551
Cluster	HCCA clusters: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g40760	No alias	DEAD box RNA helicase family protein	0.03	Orthogroups_2024-Update
Glyma.07G010500	No alias	DEA(D/H)-box RNA helicase family protein	0.03	Orthogroups_2024-Update
LOC_Os01g36860	No alias	DEAD-box ATP-dependent RNA helicase 40, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00040415-RA	No alias	(at3g01540 : 682.0) RNA HELICASE DRH1; DEAD box RNA...	0.03	Orthogroups_2024-Update
Pp1s59_81V6	No alias	rna helicase	0.02	Orthogroups_2024-Update
Solyc12g035130	No alias	RNA helicase DEAD36	0.03	Orthogroups_2024-Update
Sopen12g013640	No alias	DEAD/DEAH box helicase	0.03	Orthogroups_2024-Update
evm.model.tig00001049.35	No alias	(at1g55150 : 476.0) DEA(D/H)-box RNA helicase family...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	183	352
IPR001202	WW_dom	21	51
IPR001650	Helicase_C	389	497

External Links

No external refs found!