A4A49_13698

Description : squamosa promoter-binding-like protein 8

Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_13698
Cluster	HCCA clusters: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
At1g53160	No alias	Squamosa promoter-binding-like protein 4...	0.04	Orthogroups_2024-Update
At3g15270	No alias	SPL5 [Source:UniProtKB/TrEMBL;Acc:A0A178VL13]	0.08	Orthogroups_2024-Update
Brara.C01519.1	No alias	SBP-type transcription factor	0.02	Orthogroups_2024-Update
Cre06.g300600	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.02	Orthogroups_2024-Update
Glyma.01G063700	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.02	Orthogroups_2024-Update
Glyma.05G019000	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Orthogroups_2024-Update
Glyma.17G080700	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.03	Orthogroups_2024-Update
Glyma.18G005600	No alias	squamosa promoter binding protein-like 2	0.03	Orthogroups_2024-Update
HORVU0Hr1G020810.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os04g56170	No alias	OsSPL8 - SBP-box gene family member, expressed	0.02	Orthogroups_2024-Update
Pp1s118_9V6	No alias	sbp1 gene for squamosa promoter-binding protein SBP1	0.02	Orthogroups_2024-Update
Seita.2G324900.1	No alias	SBP-type transcription factor	0.05	Orthogroups_2024-Update
Seita.4G270400.1	No alias	SBP-type transcription factor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	177	250

External Links

No external refs found!