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  5. A4A49_13857

A4A49_13857


Description : auxin-binding protein abp19a


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_13857
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
A4A49_17289 No alias germin-like protein subfamily 3 member 2 0.03 Orthogroups_2024-Update
Brara.B00896.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.15G176900 No alias germin 3 0.03 Orthogroups_2024-Update
Glyma.17G049800 No alias germin 3 0.04 Orthogroups_2024-Update
LOC_Os01g18170 No alias Cupin domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_5449g0010 No alias (at3g10080 : 224.0) RmlC-like cupins superfamily... 0.03 Orthogroups_2024-Update
MA_926447g0010 No alias (at5g20630 : 238.0) Encodes a germin-like protein. Its... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEA InterProScan predictions
CC GO:0005737 cytoplasm IEA InterProScan predictions
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007242 Atg12 7 88
IPR006045 Cupin_1 126 270
No external refs found!