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  5. A4A49_14246

A4A49_14246


Description : putative e3 ubiquitin-protein ligase ari8


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_14246
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Bradi1g69300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g41760 No alias IBR domain-containing protein 0.04 Orthogroups_2024-Update
Bradi3g48130 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.15G031100 No alias IBR domain-containing protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G055260.4 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
LOC_Os04g41470 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_88915g0010 No alias (at1g65430 : 735.0) ARIADNE 8 (ARI8); FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
PSME_00019570-RA No alias (at1g65430 : 765.0) ARIADNE 8 (ARI8); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00028716-RA No alias (at2g16090 : 537.0) ARIADNE 2 (ARI2); FUNCTIONS IN: zinc... 0.01 Orthogroups_2024-Update
Potri.008G077100 No alias IBR domain-containing protein 0.06 Orthogroups_2024-Update
Pp1s6_282V6 No alias protein ariadne- 0.03 Orthogroups_2024-Update
Sobic.007G185900.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g109280 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G16090.4) 0.03 Orthogroups_2024-Update
Sopen11g004370 No alias IBR domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002867 IBR_dom 209 271
IPR002867 IBR_dom 288 336
No external refs found!