A4A49_14436

Description : agamous-like mads-box protein agl11

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_14436
Cluster	HCCA clusters: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
A4A49_11564	No alias	developmental protein sepallata 1	0.04	Orthogroups_2024-Update
A4A49_14235	No alias	developmental protein sepallata 1	0.04	Orthogroups_2024-Update
A4A49_14828	No alias	agamous-like mads-box protein agl104	0.05	Orthogroups_2024-Update
A4A49_19521	No alias	developmental protein sepallata 1	0.04	Orthogroups_2024-Update
A4A49_20590	No alias	mads-box transcription factor 27	0.04	Orthogroups_2024-Update
A4A49_20769	No alias	agamous-like mads-box protein agl15	0.03	Orthogroups_2024-Update
A4A49_22632	No alias	floral homeotic protein agamous	0.03	Orthogroups_2024-Update
A4A49_63038	No alias	agamous-like mads-box protein agl19	0.03	Orthogroups_2024-Update
At1g26310	No alias	Transcription factor CAULIFLOWER...	0.05	Orthogroups_2024-Update
At1g77980	No alias	Agamous-like MADS-box protein AGL66...	0.04	Orthogroups_2024-Update
At2g45660	No alias	SOC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL4]	0.04	Orthogroups_2024-Update
At4g11880	No alias	Agamous-like MADS-box protein AGL14...	0.03	Orthogroups_2024-Update
At4g22950	No alias	Agamous-like MADS-box protein AGL19...	0.03	Orthogroups_2024-Update
Bradi1g08340	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Bradi2g57000	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Brara.H01746.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00360.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.05G018900	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.07G081300	No alias	AGAMOUS-like 6	0.03	Orthogroups_2024-Update
LOC_Os03g54170	No alias	OsMADS34 - MADS-box family gene with MIKCc type-box, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g30810	No alias	OsMADS75 - MADS-box family gene with M-alpha type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g32948	No alias	OsMADS8 - MADS-box family gene with MIKCc type-box, expressed	0.03	Orthogroups_2024-Update
Potri.001G112400	No alias	AGAMOUS-like 19	0.04	Orthogroups_2024-Update
Potri.005G091100	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Potri.006G048700	No alias	AGAMOUS-like 18	0.03	Orthogroups_2024-Update
Potri.012G062300	No alias	AGAMOUS-like 8	0.03	Orthogroups_2024-Update
Potri.012G125600	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Potri.014G074100	No alias	AGAMOUS-like 6	0.03	Orthogroups_2024-Update
Pp1s34_373V6	No alias	mikc* mads-box transcription factor	0.02	Orthogroups_2024-Update
Seita.4G177800.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Solyc01g106710	No alias	Transcription factor, MADS-box (AHRD V3.3 *** A0A103YIH6_CYNCS)	0.02	Orthogroups_2024-Update
Solyc03g114830	No alias	FRUITFULL-like MADS-box 2	0.03	Orthogroups_2024-Update
Sopen08g021160	No alias	SRF-type transcription factor (DNA-binding and...	0.04	Orthogroups_2024-Update
Sopen12g029050	No alias	SRF-type transcription factor (DNA-binding and...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	57
IPR002487	TF_Kbox	83	171

External Links

No external refs found!

A4A49_14436

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation