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  5. Sopen10g033170

Sopen10g033170


Description : HAT (Half-A-TPR) repeat


Gene families : OG_42_0002221 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002221_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g033170
Cluster HCCA clusters: Cluster_374

Target Alias Description ECC score Gene Family Method Actions
442275 No alias crooked neck protein, putative / cell cycle protein, putative 0.02 Orthogroups_2024-Update
A4A49_14173 No alias putative sodiummetabolite cotransporter bass5, chloroplastic 0.02 Orthogroups_2024-Update
Brara.B03139.1 No alias component *(CRN/MAC10) of non-snRNP MOS4-associated complex 0.03 Orthogroups_2024-Update
Pp1s5_399V6 No alias K16L22.5; cell cycle control crn (crooked neck)... 0.02 Orthogroups_2024-Update
Sobic.009G138800.3 No alias component *(CRN/MAC10) of non-snRNP MOS4-associated complex 0.02 Orthogroups_2024-Update
Solyc03g007560 No alias LOW QUALITY:Crooked neck protein, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003107 HAT 188 216
No external refs found!