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  5. Sopen10g033270

Sopen10g033270


Description : Pectinesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g033270
Cluster HCCA clusters: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
A4A49_38924 No alias putative pectinesterase 53 0.03 Orthogroups_2024-Update
At2g36700 No alias Putative pectinesterase 14... 0.03 Orthogroups_2024-Update
Bradi4g00840 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.02 Orthogroups_2024-Update
Glyma.08G033000 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc12g098340 No alias Pectinesterase (AHRD V3.3 *** K4DHK8_SOLLC) 0.02 Orthogroups_2024-Update
Sopen07g022810 No alias Pectinesterase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 9 295
No external refs found!