A4A49_14920


Description : nuclear pore complex protein nup50a


Gene families : OG_42_0004029 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004029_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_14920
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Bradi1g33117 No alias NUP50 (Nucleoporin 50 kDa) protein 0.04 Orthogroups_2024-Update
Brara.E01582.1 No alias nucleoporin of nuclear pore complex *(NUP50) 0.03 Orthogroups_2024-Update
Potri.003G056400 No alias NUP50 (Nucleoporin 50 kDa) protein 0.03 Orthogroups_2024-Update
evm.model.contig_2031.1 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA InterProScan predictions
BP GO:0046907 intracellular transport IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000156 Ran_bind_dom 313 427
IPR015007 NUP2/50/61 13 77
No external refs found!