A4A49_15130

Description : hypothetical protein

Gene families : OG_42_0000547 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_15130
Cluster	HCCA clusters: Cluster_161

Target	Alias	Description	ECC score	Gene Family Method
A4A49_26450	No alias	hypothetical protein	0.04	Orthogroups_2024-Update
Brara.F02993.1	No alias	mRNA endoribonuclease *(G3BP)	0.03	Orthogroups_2024-Update
Pp1s6_129V6	No alias	rna binding	0.03	Orthogroups_2024-Update
Sopen06g034680	No alias	Nuclear transport factor 2 (NTF2) domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	590	604
IPR002075	NTF2	14	130
IPR000504	RRM_dom	306	364

External Links

No external refs found!