Sopen10g033500

Description : ATPase family associated with various cellular activities (AAA)

Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g033500
Cluster	HCCA clusters: Cluster_201

Target	Alias	Description	ECC score	Gene Family Method
At3g53230	No alias	Cell division control protein 48 homolog D...	0.03	Orthogroups_2024-Update
Brara.A03507.1	No alias	platform ATPase CDC48	0.03	Orthogroups_2024-Update
Brara.E03061.1	No alias	platform ATPase CDC48	0.03	Orthogroups_2024-Update
GRMZM2G036765	No alias	ATPase, AAA-type, CDC48 protein	0.02	Orthogroups_2024-Update
Glyma.06G180000	No alias	ATPase, AAA-type, CDC48 protein	0.04	Orthogroups_2024-Update
Mp2g12350.1	No alias	Calmodulin-interacting protein 111 OS=Arabidopsis...	0.02	Orthogroups_2024-Update
PSME_00030820-RA	No alias	(at3g53230 : 556.0) ATPase, AAA-type, CDC48 protein;...	0.02	Orthogroups_2024-Update
PSME_00054059-RA	No alias	(p54774\|cdc48_soybn : 515.0) Cell division cycle protein...	0.04	Orthogroups_2024-Update
Potri.006G125500	No alias	ATPase, AAA-type, CDC48 protein	0.03	Orthogroups_2024-Update
Seita.9G239600.1	No alias	platform ATPase CDC48	0.04	Orthogroups_2024-Update
Seita.9G314100.1	No alias	platform ATPase CDC48	0.03	Orthogroups_2024-Update
Sobic.001G236300.1	No alias	platform ATPase CDC48	0.02	Orthogroups_2024-Update
Sopen01g030300	No alias	ATPase family associated with various cellular activities (AAA)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003338	CDC4_N-term_subdom	30	111
IPR003959	ATPase_AAA_core	245	374
IPR003959	ATPase_AAA_core	518	651
IPR015415	Vps4_C	732	764
IPR004201	Cdc48_dom2	132	194

External Links

No external refs found!