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  5. Sopen10g033530

Sopen10g033530


Description : PPR repeat family


Gene families : OG_42_0009572 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009572_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g033530
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Solyc10g084080 No alias Pentatricopeptide repeat superfamily protein, putative... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 12 41
IPR002885 Pentatricopeptide_repeat 324 372
IPR002885 Pentatricopeptide_repeat 183 230
IPR002885 Pentatricopeptide_repeat 116 160
IPR002885 Pentatricopeptide_repeat 253 302
IPR002885 Pentatricopeptide_repeat 43 92
No external refs found!