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  5. Sopen10g033540

Sopen10g033540


Description : PPR repeat family


Gene families : OG_42_0009572 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009572_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g033540
Cluster HCCA clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Potri.003G008900 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 494 536
IPR002885 Pentatricopeptide_repeat 275 324
IPR002885 Pentatricopeptide_repeat 614 656
IPR002885 Pentatricopeptide_repeat 172 219
IPR002885 Pentatricopeptide_repeat 415 464
IPR002885 Pentatricopeptide_repeat 346 392
IPR002885 Pentatricopeptide_repeat 557 606
IPR002885 Pentatricopeptide_repeat 244 273
IPR002885 Pentatricopeptide_repeat 104 130
No external refs found!