Sopen10g033660

Description : FAR1 DNA-binding domain

Gene families : OG_42_0010871 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010871_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g033660
Cluster	HCCA clusters: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method	Actions
At3g06250	No alias	Protein FAR1-RELATED SEQUENCE 7...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004330	FAR1_DNA_bnd_dom	50	124
IPR004330	FAR1_DNA_bnd_dom	205	279
IPR007527	Znf_SWIM	662	689
IPR018289	MULE_transposase_dom	379	470

External Links

No external refs found!