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  5. A4A49_15500

A4A49_15500


Description : high mobility group b protein 7


Gene families : OG_42_0000453 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_15500
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Brara.B03718.1 No alias DNA bending architectural protein *(HMG-B) 0.04 Orthogroups_2024-Update
Cre11.g480950 No alias high mobility group B3 0.02 Orthogroups_2024-Update
Glyma.10G288300 No alias high-mobility group box 6 0.07 Orthogroups_2024-Update
Kfl00271_0080 kfl00271_0080_v1.1 (at5g23420 : 89.4) Encodes HMGB6, a protein belonging to... 0.02 Orthogroups_2024-Update
LOC_Os09g37910 No alias HMG1/2, putative, expressed 0.02 Orthogroups_2024-Update
MA_86565g0010 No alias (at5g23420 : 100.0) Encodes HMGB6, a protein belonging... 0.07 Orthogroups_2024-Update
Pp1s106_177V6 No alias dna-binding protein 0.03 Orthogroups_2024-Update
Sobic.007G000500.1 No alias DNA bending architectural protein *(HMG-B) 0.04 Orthogroups_2024-Update
Solyc04g008820 No alias High mobility group protein (AHRD V3.3 *-* O49948_SOLTU) 0.06 Orthogroups_2024-Update
Sopen04g004000 No alias HMG (high mobility group) box 0.05 Orthogroups_2024-Update
evm.model.tig00000663.58 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 108 174
No external refs found!