A4A49_15893

Description : putative disease resistance protein rga3

Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_15893
Cluster	HCCA clusters: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
Glyma.01G035400	No alias	NB-ARC domain-containing disease resistance protein	0.01	Orthogroups_2024-Update
HORVU0Hr1G032250.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU3Hr1G078990.16	No alias	Unknown function	0.04	Orthogroups_2024-Update
Potri.001G379700	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.003G199100	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.003G200120	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.011G005900	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Orthogroups_2024-Update
Seita.6G233400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.6G235800.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Sobic.005G220200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sopen08g024300	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	566	618
IPR002182	NB-ARC	166	406

External Links

No external refs found!