A4A49_15968


Description : auxin response factor 6


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_15968
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
424114 No alias auxin response factor 6 0.03 Orthogroups_2024-Update
A4A49_10146 No alias auxin response factor 2 0.03 Orthogroups_2024-Update
A4A49_18150 No alias auxin response factor 8 0.03 Orthogroups_2024-Update
Bradi2g46190 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
GRMZM2G102845 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
Glyma.07G054800 No alias auxin response factor 18 0.05 Orthogroups_2024-Update
Glyma.08G027800 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
Glyma.12G174100 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
PSME_00020341-RA No alias (at1g19220 : 630.0) Encodes an auxin response factor... 0.03 Orthogroups_2024-Update
Seita.1G090900.1 No alias ARF-type transcription factor & auxin signal mediator... 0.03 Orthogroups_2024-Update
Seita.1G241500.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G321300.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Sopen07g023180 No alias Auxin response factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0009725 response to hormone IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 254 337
IPR033389 AUX/IAA_dom 750 843
IPR003340 B3_DNA-bd 128 229
No external refs found!