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  5. A4A49_16129

A4A49_16129


Description : putative pectate lyase 18


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_16129
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
A4A49_12542 No alias pectate lyase 0.06 Orthogroups_2024-Update
A4A49_23917 No alias putative pectate lyase 13 0.04 Orthogroups_2024-Update
A4A49_24630 No alias putative pectate lyase 3 0.03 Orthogroups_2024-Update
A4A49_35525 No alias putative pectate lyase 16 0.04 Orthogroups_2024-Update
A4A49_40134 No alias putative pectate lyase p59 0.04 Orthogroups_2024-Update
At3g07010 No alias Probable pectate lyase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Z8] 0.04 Orthogroups_2024-Update
At3g53190 No alias Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q56XU8] 0.03 Orthogroups_2024-Update
At3g54920 No alias Probable pectate lyase 13... 0.03 Orthogroups_2024-Update
Brara.A01481.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Brara.B01740.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Brara.G00648.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.G02558.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.I04991.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.K00935.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.K01484.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
GRMZM2G323418 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Glyma.11G244900 No alias Pectate lyase family protein 0.04 Orthogroups_2024-Update
Glyma.17G126500 No alias Pectin lyase-like superfamily protein 0.08 Orthogroups_2024-Update
HORVU2Hr1G002930.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
MA_10205415g0010 No alias (at5g63180 : 429.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_10433252g0010 No alias (at3g24670 : 194.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
MA_203992g0010 No alias (at4g24780 : 544.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
MA_956526g0010 No alias (at1g67750 : 523.0) Pectate lyase family protein;... 0.03 Orthogroups_2024-Update
PSME_00000524-RA No alias (at4g24780 : 590.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00005709-RA No alias (at3g07010 : 494.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00009672-RA No alias (at5g48900 : 608.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00017512-RA No alias (at4g24780 : 545.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00019558-RA No alias (at4g13710 : 625.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00029400-RA No alias (at5g63180 : 504.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00032290-RA No alias (at4g24780 : 602.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00036578-RA No alias (at5g48900 : 578.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00041064-RA No alias (at1g67750 : 595.0) Pectate lyase family protein;... 0.03 Orthogroups_2024-Update
Potri.001G052300 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.003G175900 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G182200 No alias Pectate lyase family protein 0.04 Orthogroups_2024-Update
Potri.012G091500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G178100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G087800 No alias Pectin lyase-like superfamily protein 0.06 Orthogroups_2024-Update
Pp1s173_162V6 No alias pectate lyase 0.02 Orthogroups_2024-Update
Pp1s1_550V6 No alias Pectate lyase precursor (ZePel) [Zinnia elegans] 0.02 Orthogroups_2024-Update
Pp1s84_82V6 No alias pectate lyase 0.03 Orthogroups_2024-Update
Pp1s92_84V6 No alias F12A21.12; pectate lyase family protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Solyc02g087670 No alias Pectate lyase (AHRD V3.3 *** K4BBS3_SOLLC) 0.03 Orthogroups_2024-Update
Solyc06g083580 No alias Pectate lyase (AHRD V3.3 *** A0A022QXK5_ERYGU) 0.03 Orthogroups_2024-Update
Solyc09g061890 No alias Pectate lyase (AHRD V3.3 *** M1BAL5_SOLTU) 0.03 Orthogroups_2024-Update
Sopen05g033960 No alias Pectate lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 142 323
No external refs found!