Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen10g034070 | |
Cluster | HCCA clusters: Cluster_233 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
140819 | No alias | glycine-rich RNA-binding protein 4 | 0.02 | Orthogroups_2024-Update | |
At1g74230 | No alias | Glycine-rich RNA-binding protein 5, mitochondrial... | 0.03 | Orthogroups_2024-Update | |
At2g37510 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein... | 0.02 | Orthogroups_2024-Update | |
At3g46020 | No alias | At3g46020 [Source:UniProtKB/TrEMBL;Acc:Q9LZT1] | 0.02 | Orthogroups_2024-Update | |
At5g61030 | No alias | GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5] | 0.04 | Orthogroups_2024-Update | |
Bradi3g24720 | No alias | glycine-rich RNA-binding protein 3 | 0.03 | Orthogroups_2024-Update | |
Brara.C04224.1 | No alias | RNA editing factor *(ORRM3) | 0.03 | Orthogroups_2024-Update | |
Glyma.20G113200 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G059000.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Mp6g08160.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.02 | Orthogroups_2024-Update | |
Potri.001G319800 | No alias | glycine-rich RNA-binding protein 2 | 0.03 | Orthogroups_2024-Update | |
Potri.001G319900 | No alias | glycine-rich RNA-binding protein 2 | 0.02 | Orthogroups_2024-Update | |
Potri.004G155300 | No alias | cold, circadian rhythm, and RNA binding 1 | 0.02 | Orthogroups_2024-Update | |
Potri.009G116400 | No alias | cold, circadian rhythm, and RNA binding 1 | 0.03 | Orthogroups_2024-Update | |
Potri.017G059000 | No alias | glycine-rich RNA-binding protein 2 | 0.02 | Orthogroups_2024-Update | |
Seita.5G427300.1 | No alias | RNA editing factor *(ORRM3) | 0.02 | Orthogroups_2024-Update | |
Sobic.007G034400.1 | No alias | RNA editing factor *(ORRM2) | 0.02 | Orthogroups_2024-Update | |
Solyc05g053780 | No alias | RNA binding protein-like protein (AHRD V3.3 *** Q3HVL3_SOLTU) | 0.04 | Orthogroups_2024-Update | |
Solyc10g081180 | No alias | RNA-binding protein (AHRD V3.3 *-* Q941H9_TOBAC) | 0.03 | Orthogroups_2024-Update | |
Solyc10g084630 | No alias | RNA-binding family protein (AHRD V3.3 *** A0A061ET74_THECC) | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 33 | 99 |
No external refs found! |