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  5. A4A49_16214

A4A49_16214


Description : dexh-box atp-dependent rna helicase dexh9


Gene families : OG_42_0001297 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_16214
Cluster HCCA clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G040995 No alias RNA helicase, ATP-dependent, SK12/DOB1 protein 0.03 Orthogroups_2024-Update
LOC_Os11g07500 No alias DSHCT domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp4g03900.1 No alias RNA helicase component MTR4/HEN2 of Nuclear Exosome... 0.02 Orthogroups_2024-Update
Potri.004G228700 No alias RNA helicase, ATP-dependent, SK12/DOB1 protein 0.03 Orthogroups_2024-Update
Pp1s69_14V6 No alias superkiller viralicidic activity 2-like 2 0.03 Orthogroups_2024-Update
evm.model.tig00020723.108 No alias (at1g59760 : 938.0) RNA helicase, ATP-dependent,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025696 rRNA_proc-arch_dom 521 791
IPR012961 Ski2_C 819 988
IPR011545 DEAD/DEAH_box_helicase_dom 73 220
No external refs found!