A4A49_16490

Description : homeobox protein knotted-1-like 1

Gene families : OG_42_0000234 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_16490

Target	Alias	Description	ECC score	Gene Family Method
Brara.B01915.1	No alias	KNOX-type transcription factor	0.01	Orthogroups_2024-Update
Brara.B03654.1	No alias	KNOX-type transcription factor	0.01	Orthogroups_2024-Update
Brara.H02211.1	No alias	KNOX-type transcription factor	0.01	Orthogroups_2024-Update
Brara.I01203.1	No alias	KNOX-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I01459.1	No alias	KNOX-type transcription factor	0.01	Orthogroups_2024-Update
Glyma.01G214800	No alias	KNOTTED-like homeobox of Arabidopsis thaliana 7	0.03	Orthogroups_2024-Update
Glyma.04G049500	No alias	KNOTTED-like from Arabidopsis thaliana	0.01	Orthogroups_2024-Update
Glyma.09G007500	No alias	KNOX/ELK homeobox transcription factor	0.06	Orthogroups_2024-Update
Glyma.13G157300	No alias	KNOTTED1-like homeobox gene 3	0.01	Orthogroups_2024-Update
Glyma.15G257800	No alias	KNOTTED1-like homeobox gene 6	0.02	Orthogroups_2024-Update
Glyma.17G104800	No alias	KNOTTED1-like homeobox gene 3	0.01	Orthogroups_2024-Update
HORVU5Hr1G098570.6	No alias	KNOX-type transcription factor	0.06	Orthogroups_2024-Update
MA_10428446g0010	No alias	(at4g08150 : 291.0) A member of class I knotted1-like...	0.03	Orthogroups_2024-Update
PSME_00000683-RA	No alias	(at5g11060 : 216.0) A member of Class II KN1-like...	0.02	Orthogroups_2024-Update
Sobic.001G106000.2	No alias	KNOX-type transcription factor	0.01	Orthogroups_2024-Update
Sobic.001G106200.1	No alias	KNOX-type transcription factor	0.01	Orthogroups_2024-Update
Solyc02g081120	No alias	class 1 knotted-like homeodomain protein	0.03	Orthogroups_2024-Update
Solyc08g041820	No alias	Homeobox protein knotted-1, putative (AHRD V3.3 *** B9RNZ6_RICCO)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005540	KNOX1	57	98
IPR005541	KNOX2	108	154
IPR008422	Homeobox_KN_domain	250	289
IPR005539	ELK_dom	210	231

External Links

No external refs found!

A4A49_16490

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation