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  5. A4A49_16801

A4A49_16801


Description : putative pectate lyase 1


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_16801
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
At1g67750 No alias Probable pectate lyase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXD8] 0.04 Orthogroups_2024-Update
At3g53190 No alias Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q56XU8] 0.04 Orthogroups_2024-Update
At5g04310 No alias Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F4JW80] 0.03 Orthogroups_2024-Update
Brara.B01740.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Brara.D00728.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Glyma.18G255900 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Potri.011G008100 No alias root hair specific 14 0.03 Orthogroups_2024-Update
Potri.015G087800 No alias Pectin lyase-like superfamily protein 0.05 Orthogroups_2024-Update
Solyc05g055510 No alias Pectate lyase (AHRD V3.3 *** K4C2M7_SOLLC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 230 407
No external refs found!