A4A49_17195

Description : heterogeneous nuclear ribonucleoprotein 1

Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_17195
Cluster	HCCA clusters: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method
Glyma.04G047800	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.03	Orthogroups_2024-Update
Kfl00820_0060	kfl00820_0060_v1.1	(at4g26650 : 261.0) RNA-binding (RRM/RBD/RNP motifs)...	0.05	Orthogroups_2024-Update
PSME_00002450-RA	No alias	(at3g13224 : 266.0) RNA-binding (RRM/RBD/RNP motifs)...	0.05	Orthogroups_2024-Update
PSME_00052866-RA	No alias	(at3g07810 : 196.0) RNA-binding (RRM/RBD/RNP motifs)...	0.02	Orthogroups_2024-Update
Sobic.010G171100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc11g012470	No alias	RNA-binding protein, putative (AHRD V3.3 *** Q1ENZ5_MUSAC)	0.02	Orthogroups_2024-Update
Sopen12g002130	No alias	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	8	69
IPR000504	RRM_dom	108	165

External Links

No external refs found!