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  5. A4A49_17367

A4A49_17367


Description : cyclic nucleotide-gated ion channel 1


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_17367
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
266514 No alias cyclic nucleotide-gated channel 15 0.02 Orthogroups_2024-Update
A4A49_19266 No alias putative cyclic nucleotide-gated ion channel 8 0.03 Orthogroups_2024-Update
A4A49_26569 No alias putative cyclic nucleotide-gated ion channel 16 0.03 Orthogroups_2024-Update
Bradi1g46970 No alias cyclic nucleotide-gated channel 17 0.03 Orthogroups_2024-Update
Brara.C03656.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Glyma.07G025000 No alias cyclic nucleotide gated channel 19 0.03 Orthogroups_2024-Update
Glyma.16G025400 No alias cyclic nucleotide-gated channel 13 0.02 Orthogroups_2024-Update
Potri.002G170000 No alias cyclic nucleotide gated channel 10 0.03 Orthogroups_2024-Update
Potri.006G271480 No alias cyclic nucleotide-gated channel 14 0.03 Orthogroups_2024-Update
Potri.009G010700 No alias cyclic nucleotide-gated channel 15 0.03 Orthogroups_2024-Update
Potri.014G097900 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Potri.015G033900 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Potri.018G009200 No alias cyclic nucleotide-gated channel 14 0.05 Orthogroups_2024-Update
Pp1s211_70V6 No alias T3B23.7; cyclic nucleotide-regulated ion channel,... 0.03 Orthogroups_2024-Update
Seita.7G259800.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.9G156700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sopen08g022780 No alias Ion transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 499 589
IPR005821 Ion_trans_dom 89 405
No external refs found!