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  5. Sopen10g034990

Sopen10g034990


Description : NUC153 domain


Gene families : OG_42_0003879 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003879_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g034990
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
126756 No alias embryo sac development arrest 7 0.03 Orthogroups_2024-Update
At3g56990 No alias AT3g56990/F24I3_70 [Source:UniProtKB/TrEMBL;Acc:Q9M1J9] 0.03 Orthogroups_2024-Update
Bradi1g49657 No alias embryo sac development arrest 7 0.04 Orthogroups_2024-Update
Cre03.g159950 No alias embryo sac development arrest 7 0.03 Orthogroups_2024-Update
GRMZM2G087196 No alias embryo sac development arrest 7 0.04 Orthogroups_2024-Update
GRMZM2G092797 No alias embryo sac development arrest 7 0.06 Orthogroups_2024-Update
Glyma.07G106900 No alias embryo sac development arrest 7 0.03 Orthogroups_2024-Update
Glyma.09G171000 No alias embryo sac development arrest 7 0.03 Orthogroups_2024-Update
Kfl00345_0030 kfl00345_0030_v1.1 (at3g56990 : 589.0) embryo sac development arrest 7... 0.02 Orthogroups_2024-Update
Mp7g13920.1 No alias no hits & (original description: none) 0.04 Orthogroups_2024-Update
Seita.4G017800.1 No alias Unknown function 0.13 Orthogroups_2024-Update
Sobic.010G017900.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc10g085580 No alias putative embryo sac development arrest 7 0.05 Orthogroups_2024-Update
evm.model.tig00000388.46 No alias (at3g56990 : 320.0) embryo sac development arrest 7... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012580 NUC153 501 528
No external refs found!