A4A49_17694

Description : e3 ubiquitin-protein ligase rma1h1

Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_17694
Cluster	HCCA clusters: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
Glyma.06G034500	No alias	RING/U-box superfamily protein	0.04	Orthogroups_2024-Update
Glyma.12G112000	No alias	RING membrane-anchor 1	0.05	Orthogroups_2024-Update
LOC_Os02g42690	No alias	zinc finger, C3HC4 type domain containing protein, expressed	0.02	Orthogroups_2024-Update
Mp8g08340.1	No alias	RING-HC-class E3 ligase	0.02	Orthogroups_2024-Update
PSME_00026187-RA	No alias	(at2g23780 : 114.0) RING/U-box superfamily protein;...	0.03	Orthogroups_2024-Update
Seita.3G404600.1	No alias	E3 ubiquitin ligase *(RMA/MUSE)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018957	Znf_C3HC4_RING-type	43	91

External Links

No external refs found!