A4A49_17766

Description : heterogeneous nuclear ribonucleoprotein 1

Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_17766
Cluster	HCCA clusters: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
At1g58470	No alias	RNA-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C652]	0.02	Orthogroups_2024-Update
At5g47620	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein...	0.03	Orthogroups_2024-Update
Brara.H00896.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Pp1s13_162V6	No alias	hnrnp-like protein	0.01	Orthogroups_2024-Update
Seita.2G070900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sopen04g006950	No alias	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.02	Orthogroups_2024-Update
Sopen07g024450	No alias	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	6	73
IPR000504	RRM_dom	105	163

External Links

No external refs found!