A4A49_18078

Description : developmental protein sepallata 1

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_18078
Cluster	HCCA clusters: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
A4A49_23146	No alias	mads-box transcription factor 6	0.04	Orthogroups_2024-Update
At1g77950	No alias	AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6]	0.04	Orthogroups_2024-Update
At2g24840	No alias	Agamous-like MADS-box protein AGL61...	0.03	Orthogroups_2024-Update
At5g51860	No alias	MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5]	0.06	Orthogroups_2024-Update
Bradi1g08340	No alias	K-box region and MADS-box transcription factor family protein	0.05	Orthogroups_2024-Update
Bradi1g69890	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Bradi3g32090	No alias	AGAMOUS-like 20	0.04	Orthogroups_2024-Update
Bradi3g51800	No alias	AGAMOUS-like 6	0.02	Orthogroups_2024-Update
Bradi5g21700	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Brara.C00694.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.E00310.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02103.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
GRMZM2G133568	No alias	AGAMOUS-like 16	0.03	Orthogroups_2024-Update
Glyma.01G020500	No alias	AGAMOUS-like 21	0.04	Orthogroups_2024-Update
Glyma.02G179300	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.03G019300	No alias	AGAMOUS-like 20	0.06	Orthogroups_2024-Update
Glyma.08G282500	No alias	AGAMOUS-like 29	0.02	Orthogroups_2024-Update
Glyma.08G310100	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Glyma.10G084700	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Glyma.10G085600	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Glyma.11G252300	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.13G034100	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.13G223300	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
HORVU3Hr1G095200.15	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G110470.1	No alias	MADS/AGL-type transcription factor	0.05	Orthogroups_2024-Update
HORVU6Hr1G002270.1	No alias	MADS/AGL-type transcription factor	0.06	Orthogroups_2024-Update
HORVU7Hr1G054390.1	No alias	MADS/AGL-type transcription factor	0.06	Orthogroups_2024-Update
MA_35712g0010	No alias	(at4g11880 : 102.0) AGL12, AGL14, and AGL17 are all...	0.02	Orthogroups_2024-Update
MA_458668g0010	No alias	(at2g45660 : 100.0) Controls flowering and is required...	0.02	Orthogroups_2024-Update
Potri.003G170000	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Potri.004G002400	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Potri.017G047300	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Potri.T101400	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Pp1s163_70V6	No alias	mikc* mads-box transcription factor	0.02	Orthogroups_2024-Update
Pp1s163_73V6	No alias	mikc* mads-box transcription factor	0.03	Orthogroups_2024-Update
Pp1s267_56V6	No alias	agamous-like protein	0.03	Orthogroups_2024-Update
Seita.1G308200.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
Seita.3G236800.1	No alias	component *(PISTILLATA) of AP3-PISTILLATA organ-identity...	0.09	Orthogroups_2024-Update
Seita.5G101300.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G192900.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Solyc01g060300	No alias	damaged DNA binding 2 (AHRD V3.3 --* AT5G58760.2)	0.03	Orthogroups_2024-Update
Solyc04g005320	No alias	MADS-box transcription factor (AHRD V3.3 *** Q8S4L4_SOLLC)	0.03	Orthogroups_2024-Update
Solyc08g067230	No alias	MADS box transcription factor (AHRD V3.3 *** G3EIU8_9SOLA)	0.08	Orthogroups_2024-Update
Solyc12g056460	No alias	MADS box transcription factor (AHRD V3.3 *** C3PTE7_POPTO)	0.04	Orthogroups_2024-Update
Sopen02g034000	No alias	K-box region	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	57
IPR002487	TF_Kbox	84	171

External Links

No external refs found!

A4A49_18078

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation