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  5. A4A49_18116

A4A49_18116


Description : ring-h2 finger protein atl78


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_18116
Cluster HCCA clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
8844 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_08432 No alias ring-h2 finger protein atl70 0.04 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.03 Orthogroups_2024-Update
A4A49_36505 No alias e3 ubiquitin-protein ligase atl6 0.05 Orthogroups_2024-Update
A4A49_36993 No alias ring-h2 finger protein atl52 0.04 Orthogroups_2024-Update
A4A49_40065 No alias ring-h2 finger protein atl70 0.04 Orthogroups_2024-Update
A4A49_42691 No alias ring-h2 finger protein atl7 0.04 Orthogroups_2024-Update
At1g49210 No alias E3 ubiquitin-protein ligase ATL76... 0.01 Orthogroups_2024-Update
At1g72200 No alias RING-H2 finger protein ATL11... 0.03 Orthogroups_2024-Update
At2g17450 No alias Probable E3 ubiquitin-protein ligase ATL44... 0.03 Orthogroups_2024-Update
At2g35000 No alias E3 ubiquitin-protein ligase ATL9... 0.03 Orthogroups_2024-Update
At2g42350 No alias RING-H2 finger protein ATL40... 0.04 Orthogroups_2024-Update
At2g42360 No alias E3 ubiquitin-protein ligase ATL41... 0.03 Orthogroups_2024-Update
At3g10910 No alias RING-H2 finger protein ATL72... 0.02 Orthogroups_2024-Update
At3g19140 No alias Putative RING-H2 finger protein ATL62... 0.03 Orthogroups_2024-Update
At4g09100 No alias RING-H2 finger protein ATL39... 0.02 Orthogroups_2024-Update
At4g09130 No alias Putative RING-H2 finger protein ATL37... 0.03 Orthogroups_2024-Update
At4g40070 No alias RING-H2 finger protein ATL32... 0.02 Orthogroups_2024-Update
At5g06490 No alias Putative RING-H2 finger protein ATL71... 0.03 Orthogroups_2024-Update
At5g41450 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g46750 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g32634 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g44454 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
Bradi5g09830 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g19490 No alias RING-H2 finger A3A 0.03 Orthogroups_2024-Update
Brara.A03736.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C01805.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C01806.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Brara.E01886.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F00385.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G01336.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G03107.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I02510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.K00292.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Cre11.g476250 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
GRMZM2G146847 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G340444 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G386584 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G478553 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G203400 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.03G239900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G222300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G188900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G143100 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G070100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G177000 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.09G067900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.10G289100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G208600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G042300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G177900 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.14G178400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G056000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G025700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G010400 No alias hypoxia-responsive family protein / zinc finger... 0.03 Orthogroups_2024-Update
Glyma.19G212000 No alias AtL5 0.03 Orthogroups_2024-Update
HORVU0Hr1G021450.9 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G082030.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G074210.1 No alias regulatory ubiquitin-protein ligase *(PRU2) 0.03 Orthogroups_2024-Update
HORVU2Hr1G105980.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G028260.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU3Hr1G028280.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G028310.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G069960.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G007760.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G082840.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G087960.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G096480.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G121280.7 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G051480.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G051510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G042940.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os01g53500 No alias RING-H2 finger protein ATL2M, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g33720 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g48310 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g39940 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g45060 No alias RING-H2 finger protein ATL2M, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g09310 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g34870 No alias Zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g24490 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_101154g0010 No alias (at3g16720 : 130.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_10244600g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_10429624g0010 No alias (at3g05200 : 133.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_10436208g0010 No alias (at1g72200 : 100.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_107765g0010 No alias (at1g72200 : 140.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_114175g0010 No alias (at3g16720 : 124.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_1143g0010 No alias (at1g49230 : 105.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_12352g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_124750g0010 No alias (at5g01880 : 92.8) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_25345g0010 No alias (at1g49230 : 107.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_308999g0010 No alias (at1g72310 : 80.9) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_31462g0010 No alias (at1g49220 : 101.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_3380g0010 No alias (at1g49230 : 140.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_37578g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_37930g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_38494g0010 No alias (at1g49230 : 119.0) RING/U-box superfamily protein;... 0.06 Orthogroups_2024-Update
MA_44828g0020 No alias (at3g62690 : 89.0) Encodes a RING-H2 zinc finger protein... 0.03 Orthogroups_2024-Update
MA_479316g0010 No alias (at3g16720 : 91.3) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
MA_5319g0010 No alias (at1g49230 : 120.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_634100g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_69343g0010 No alias (at1g49230 : 137.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_77628g0010 No alias (at1g72310 : 116.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_8693914g0010 No alias (at5g05280 : 130.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_9143538g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.05 Orthogroups_2024-Update
MA_9515738g0010 No alias (at5g17600 : 145.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 Orthogroups_2024-Update
Mp6g19130.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00003016-RA No alias (at1g72200 : 114.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00003022-RA No alias (at1g72200 : 164.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00010570-RA No alias (at4g10150 : 105.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00011913-RA No alias (at3g51430 : 162.0) Although this enzyme is predicted to... 0.01 Orthogroups_2024-Update
PSME_00024216-RA No alias (at1g49230 : 130.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00034763-RA No alias (at5g05280 : 85.1) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00051307-RA No alias (at3g18773 : 100.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00051567-RA No alias (at3g16720 : 108.0) RING-H2 protein induced after... 0.01 Orthogroups_2024-Update
PSME_00054098-RA No alias (at3g16720 : 124.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
PSME_00057213-RA No alias (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
Potri.001G400600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G101800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G075200 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Potri.005G244800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G144200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.007G057300 No alias RING-H2 finger A3A 0.04 Orthogroups_2024-Update
Potri.007G111900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G219200 No alias TOXICOS EN LEVADURA 2 0.04 Orthogroups_2024-Update
Potri.010G206300 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Potri.010G243200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G003900 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Potri.016G067900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G136200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.019G010500 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.019G010600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.019G091400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Pp1s257_3V6 No alias ac009177_16 ring-h2 zinc finger protein atl6 0.03 Orthogroups_2024-Update
Seita.1G197500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Seita.1G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G279400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.1G379200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.2G087800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G237900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.2G238400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.2G390800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G209600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G042500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.5G023000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.5G309700.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.7G110600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G205000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G218600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.9G410900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G063900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.002G232800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.003G147301.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G339400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G114200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Sobic.004G181200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G181300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G181400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G187800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G283400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G301300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G305000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.005G012100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G165000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.008G175600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G110400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G110500.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.009G205400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.010G071000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.010G157500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g088440 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.06 Orthogroups_2024-Update
Solyc01g095180 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G61550.1) 0.04 Orthogroups_2024-Update
Solyc04g074820 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc08g076830 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc09g075320 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT4G15975.1) 0.03 Orthogroups_2024-Update
Solyc11g005320 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.02 Orthogroups_2024-Update
Solyc11g006450 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.03 Orthogroups_2024-Update
Solyc11g066510 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) 0.03 Orthogroups_2024-Update
Solyc11g073170 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.05 Orthogroups_2024-Update
Solyc12g087840 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g087860 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g031720 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen04g006320 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen06g017190 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen07g002500 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g001290 No alias Ring finger domain 0.04 Orthogroups_2024-Update
Sopen11g001310 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.tig00020563.21 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00020684.6 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 135 178
No external refs found!