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  5. A4A49_18444

A4A49_18444


Description : squamosa promoter-binding-like protein 5


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_18444
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
At2g33810 No alias Squamosa promoter-binding-like protein 3... 0.02 Orthogroups_2024-Update
At5g43270 No alias Squamosa promoter-binding-like protein 2... 0.02 Orthogroups_2024-Update
Bradi2g59110 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Bradi3g03510 No alias squamosa promoter binding protein-like 2 0.03 Orthogroups_2024-Update
Brara.I03021.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G063700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.04 Orthogroups_2024-Update
Glyma.02G121300 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.05 Orthogroups_2024-Update
Glyma.05G019000 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.06G238100 No alias squamosa promoter-binding protein-like 12 0.05 Orthogroups_2024-Update
Glyma.11G251500 No alias squamosa promoter binding protein-like 2 0.03 Orthogroups_2024-Update
Glyma.17G080700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Glyma.18G005600 No alias squamosa promoter binding protein-like 2 0.04 Orthogroups_2024-Update
LOC_Os04g46580 No alias OsSPL7 - SBP-box gene family member, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g49010 No alias OsSPL12 - SBP-box gene family member, expressed 0.04 Orthogroups_2024-Update
Mp1g10030.1 No alias transcription factor (SBP) 0.02 Orthogroups_2024-Update
Potri.011G055900 No alias squamosa promoter binding protein-like 3 0.03 Orthogroups_2024-Update
Potri.014G057800 No alias squamosa promoter binding protein-like 10 0.03 Orthogroups_2024-Update
Pp1s194_61V6 No alias squamosa promoter-binding 0.03 Orthogroups_2024-Update
Pp1s337_52V6 No alias squamosa promoter-binding 0.05 Orthogroups_2024-Update
Pp1s337_53V6 No alias T7I23.32; squamosa promoter-binding protein-like 8... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 52 125
No external refs found!