A4A49_18537

Description : e3 ubiquitin-protein ligase prt6

Gene families : OG_42_0002846 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002846_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_18537
Cluster	HCCA clusters: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
HORVU3Hr1G013090.2	No alias	type-I-residues E3 ubiquitin ligase *(PRT6)	0.03	Orthogroups_2024-Update
LOC_Os01g05500	No alias	zinc finger protein, putative, expressed	0.02	Orthogroups_2024-Update
Pp1s12_160V6	No alias	No description available	0.02	Orthogroups_2024-Update
Pp1s35_178V6	No alias	ubr3 protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003126	Znf_UBR	125	191

External Links

No external refs found!