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  5. A4A49_18667

A4A49_18667


Description : ring-h2 finger protein atl18


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_18667
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
74486 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
At2g35910 No alias RING-H2 finger protein ATL70... 0.05 Orthogroups_2024-Update
At3g03550 No alias Uncharacterized protein At3g03550... 0.03 Orthogroups_2024-Update
At4g17245 No alias AT4g17240/dl4655c [Source:UniProtKB/TrEMBL;Acc:Q940N3] 0.03 Orthogroups_2024-Update
At5g07040 No alias Putative RING-H2 finger protein ATL69... 0.03 Orthogroups_2024-Update
Brara.A00916.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B00007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.B02267.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C00776.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C01806.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Brara.E02317.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.06 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G02185.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.H01648.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I02588.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I03307.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G004519 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G015409 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G460958 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G194400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G203400 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.09G042400 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Glyma.09G264300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G156500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G169600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G242500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G242800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.13G042300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G108500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G060500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU0Hr1G021450.9 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G074210.1 No alias regulatory ubiquitin-protein ligase *(PRU2) 0.02 Orthogroups_2024-Update
HORVU3Hr1G028370.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU3Hr1G072730.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G067020.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G077610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G091610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G036380.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os02g15080 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os02g46600 No alias RING-H2 finger protein ATL5G, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g28080 No alias ring-H2 zinc finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g39640 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g02220 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10431388g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10436208g0010 No alias (at1g72200 : 100.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_10436650g0010 No alias (at1g72310 : 126.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_226198g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_5319g0010 No alias (at1g49230 : 120.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_634100g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_6931619g0010 No alias (at1g49230 : 106.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.04 Orthogroups_2024-Update
MA_98187g0010 No alias (at1g72200 : 119.0) RING/U-box superfamily protein;... 0.05 Orthogroups_2024-Update
Mp6g19130.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00003016-RA No alias (at1g72200 : 114.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00034763-RA No alias (at5g05280 : 85.1) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00057213-RA No alias (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... 0.04 Orthogroups_2024-Update
Potri.010G243200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G043200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.014G076800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G049300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Pp1s14_164V6 No alias zinc finger (c3hc4-type ring finger) family protein 0.02 Orthogroups_2024-Update
Pp1s41_270V6 No alias zinc finger (c3hc4-type ring finger) family protein 0.01 Orthogroups_2024-Update
Seita.5G368500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G321400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G032100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G373200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G189800.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G344400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G109600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g088450 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G53820.1) 0.02 Orthogroups_2024-Update
Solyc05g055140 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.02 Orthogroups_2024-Update
Solyc06g049030 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FT40_THECC) 0.02 Orthogroups_2024-Update
Solyc06g064440 No alias RING/U-box superfamily protein, putative (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc11g005300 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.02 Orthogroups_2024-Update
Solyc11g005310 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.02 Orthogroups_2024-Update
Solyc12g094690 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen02g027080 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen03g031440 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen06g015390 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen06g017190 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen06g022910 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen11g001290 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.tig00000821.27 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 87 131
No external refs found!